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Mongo, PostgreSQL Backup/Restore Procedure for EF-CX on Kubernetes ( manual procedure )



In this guide, we will evaluate procedures to backup from Mongo and PostgreSQL databases. This procedure requires that the end-user is comfortable with the common interfacing with the Kubernetes and understands basics of the kubernetes operations.

there is an actively developed guide for backups using Velero for EF-CX solution on kubernetes. This procedure is only valid for manual backup, and doesn't ascertain the continued approach for backup. Velero based backups are considered more appropriate for continuous and effective back solutions. Please refer to Kubernetes Backup/Restore using Velero

Backups

In order to save backups on your local system, create a folder under $HOME/backups

mkdir -p  $HOME/backups/{mongo,postgresql}

Mongo Backup

 In order to take backup from the current mongo databases, follow these steps

step-1 Run the mongoDB client POD
kubectl run --namespace ef-external  --tty -i   mongo-mongodb-client  --env="MONGODB_ROOT_PASSWORD=$MONGODB_ROOT_PASSWORD" --image docker.io/bitnami/mongodb:6.0.2-debian-11-r1 --command -- sleep infinity

 wait for the mongo-client pod to run. Sample run given below

#kubectl get pods -n ef-external mongo-mongodb-client
NAME                   READY   STATUS    RESTARTS   AGE
mongo-mongodb-client   1/1     Running   0          16s


step-2 Exec into the mongo client pod 
kubectl -n ef-external exec -i -t mongo-mongodb-client -- bash


step-3 take the backup of all databases from the current host
mongodump --host "mongo-mongodb" --gzip --out /tmp/mongo-backup-$(date +%Y-%m-%d)

Please note that the path of the backup has to under /tmp  folder. the above command will create a folder under /tmp with the date in YYYY-MM-DD appended e-g /tmp/mongo-backup-2023-09-12

exit out of the mongo-client pod

exit


step-4 retrieve the backup file from the POD to actual storage
kubectl -n ef-external cp  mongo-mongodb-client:/tmp/mongo-backup-2023-09-12  $HOME/backups/mongo/mongo-backup-2023-09-12

if the  above command does not work, replace the mongo-backup-$(date +%Y-%m-%d) with the actual path e-g  /tmp/mongo-backup-2023-09-12   as the time/date inside the pod might have a different folder name created




PostgreSQL Backup


For PostgreSQL backups, please follow along these steps.


step-1 export the admin  username/password pair for  postgresql-client pod
export POSTGRES_ADMIN_PASSWORD=$(kubectl get secret --namespace ef-external ef-postgresql -o jsonpath="{.data.postgres-password}" | base64 -d)

and for sa user ( default user for EF-CX component using PostgreSQL database ) 

export POSTGRES_PASSWORD=$(kubectl get secret --namespace ef-external ef-postgresql -o jsonpath="{.data.password}" | base64 -d)
step-2 launch the postgresql client
 kubectl run ef-postgresql-client  --tty -i  --namespace ef-external --image docker.io/bitnami/postgresql:14.5.0-debian-11-r21 --env="PGPASSWORD=$POSTGRES_PASSWORD"  --command -- sleep infinity
step-3  verify the pod is running
# kubectl -n ef-external get pods "ef-postgresql-client"
NAME                   READY   STATUS    RESTARTS       AGE
ef-postgresql-client   1/1     Running   15 (15d ago)   120d
step-4  exec into the postgresql-client pod 
kubectl -n ef-external exec -it ef-postgresql-client -- bash
step-5 Evolve the pod Env script

execute the environment setup for postgresql-client ( Only needed when the postgresql is running in non-HA mode , like no pgpool and multiple replicas of postgresql are running ) 

/opt/bitnami/scripts/postgresql/entrypoint.sh /bin/bash

the above step will output something like below:

I have no name!@ef-postgresql-client:/$ /opt/bitnami/scripts/postgresql/entrypoint.sh /bin/bash
postgresql 14:55:10.29
postgresql 14:55:10.29 Welcome to the Bitnami postgresql container
postgresql 14:55:10.30 Subscribe to project updates by watching https://github.com/bitnami/containers
postgresql 14:55:10.30 Submit issues and feature requests at https://github.com/bitnami/containers/issues
postgresql 14:55:10.30

postgres@ef-postgresql-client:/$


step-6 list databases to take backups.
psql --host ef-postgresql -U sa -d licenseManager -p 5432 -q -A -t -c  "SELECT datname FROM pg_database"

identify the databases in the first column of the output in previous step and continue with their backup 

step-7 Archive the backup

take backup of the keycloak_db and licenseManager Databases.

# keycloak_db database

pg_dump --host ef-postgresql -U sa  -F c -b -v -f  "/tmp/licenseManager.backup" "licenseManager"

#licenseManager database
pg_dump --host ef-postgresql -U sa  -F c -b -v -f  "/tmp/keycloak_db.backup" "keycloak_db"

exit the postgresql-client pod

exit; exit


step-8 Restore the backup onto the host

On the host System. once all the databases from the postgresql are backed up succcessfully, exit out of the postgresql client pod and recove the files onto your host system to be further saved at a secure location.

kubectl -n ef-external cp ef-postgresql-client:/tmp/keycloak_db.backup $HOME/backups/postgresql/keycloak_db.backup

kubectl -n ef-external cp ef-postgresql-client:/tmp/licenseManager.backup $HOME/backups/postgresql/licenseManager.backup



Please repeat step7 and step-8  for all required databases if other databases' backup  are also required.




Restore

PostgreSQL Restore

step-1 Admin and sa Password

export the admin  username/password pair for  postgresql-client pod

export POSTGRES_ADMIN_PASSWORD=$(kubectl get secret --namespace ef-external ef-postgresql -o jsonpath="{.data.postgres-password}" | base64 -d)

and for sa user ( default user for EF-CX component using PostgreSQL database ) 

export POSTGRES_PASSWORD=$(kubectl get secret --namespace ef-external ef-postgresql -o jsonpath="{.data.password}" | base64 -d)
step-2 launch the postgresql client
 kubectl run ef-postgresql-client  --tty -i  --namespace ef-external --image docker.io/bitnami/postgresql:14.5.0-debian-11-r21 --env="PGPASSWORD=$POSTGRES_PASSWORD"  --command -- sleep infinity
step-3  verify the pod is running
# kubectl -n ef-external get pods "ef-postgresql-client"
NAME                   READY   STATUS    RESTARTS       AGE
ef-postgresql-client   1/1     Running   15 (15d ago)   120d
step-4 Copy the dump files from host

Copy all the backup files from the host. Here we are restoring only 2 backups for keycloak_db  and licensemanage  databases

# keycloak_db database
kubectl -n ef-external cp $HOME/backups/postgresql/keycloak_db.backup  ef-postgresql-client:/tmp/keycloak_db.backup

#licenseManager database
kubectl -n ef-external cp $HOME/backups/postgresql/licenseManager.backup  ef-postgresql-client:/tmp/licenseManager.backup
step-5exec into the postgresql-client pod

once the pod is running, exec into the postgresql-client pod 

kubectl -n ef-external exec -it ef-postgresql-client -- bash
step-6 evolve the env script.

execute the environment setup for postgresql-client ( Only needed when the postgresql is running in non-HA mode , like no pgpool and multiple replicas of postgresql are running ) 

/opt/bitnami/scripts/postgresql/entrypoint.sh /bin/bash

the above step will output something like below:

I have no name!@ef-postgresql-client:/$ /opt/bitnami/scripts/postgresql/entrypoint.sh /bin/bash
postgresql 14:55:10.29
postgresql 14:55:10.29 Welcome to the Bitnami postgresql container
postgresql 14:55:10.30 Subscribe to project updates by watching https://github.com/bitnami/containers
postgresql 14:55:10.30 Submit issues and feature requests at https://github.com/bitnami/containers/issues
postgresql 14:55:10.30

postgres@ef-postgresql-client:/$



step-7 restore

Restore all databases one by one by running 

For keyclock_db;

pg_restore --host ef-postgresql -U sa  -d "keycloak_db"  -v "/tmp/keycloak_db.backup"

For licenseManager databases, DROP the existing database 

dropdb --host ef-postgresql -U sa  "licenseManager"


Create the licenseManager Databases with 'sa' user

createdb  --host ef-postgresql -U sa  "licenseManager"


verify the database is created successfully by running

psql --host ef-postgresql -U sa keycloak_db   -p 5432 -t  -c  "SELECT datname FROM pg_database"

it will display something like below:

postgres@ef-postgresql-client:/tmp$ psql --host ef-postgresql -U sa keycloak_db   -p 5432 -t  -c  "SELECT datname FROM pg_database"
 postgres
 template1
 template0
 keycloak_db
 superset

Restore the "lienceManager" Database by running

pg_restore --host ef-postgresql -U sa  -d "licenseManager"  -v "/tmp/licenseManager.backup"

Exit the postgresql-client pod.

exit



Mongo Restore

step-1 Start the client pod

Run the mongoDB client POD

kubectl run --namespace ef-external  --tty -i   mongo-mongodb-client  --env="MONGODB_ROOT_PASSWORD=$MONGODB_ROOT_PASSWORD" --image docker.io/bitnami/mongodb:6.0.2-debian-11-r1 --command -- sleep infinity

 wait for the mongo-client pod to run. Sample run given below

#kubectl get pods -n ef-external mongo-mongodb-client
NAME                   READY   STATUS    RESTARTS   AGE
mongo-mongodb-client   1/1     Running   0          16s
step-2 copy the dump from host

copy the backup into the mongo-client pod 

kubectl -n ef-external cp /root/backups/mongo mongo-mongodb-client:/tmp/
step-3 exec into the client pod

Exec into the mongo client pod 

kubectl -n ef-external exec -i -t mongo-mongodb-client -- bash
step-4 restore

restore the backup of all databases from the current host

mongorestore --host "mongo-mongodb" --gzip --verbose  /tmp/mongo


step-5 Verify the restore

login into the mongodb and verify the databases 

mongosh --host "mongo-mongodb"

and run

test> show dbs


step-6 exit the mongo client pod

exit out of the mongo-client pod

exit


/*<![CDATA[*/ div.rbtoc1769167667436 {padding: 0px;} div.rbtoc1769167667436 ul {list-style: disc;margin-left: 0px;} div.rbtoc1769167667436 li {margin-left: 0px;padding-left: 0px;} /*]]>*/ Backups Mongo Backup step-1 Run the mongoDB client POD step-2 Exec into the mongo client pod step-3 take the backup of all databases from the current host step-4 retrieve the backup file from the POD to actual storage PostgreSQL Backup step-1 export the admin username/password pair for postgresql-client pod step-2 launch the postgresql client step-3 verify the pod is running step-4 exec into the postgresql-client pod step-5 Evolve the pod Env script step-6 list databases to take backups. step-7 Archive the backup step-8 Restore the backup onto the host Restore PostgreSQL Restore step-1 Admin and sa Password step-2 launch the postgresql client step-3 verify the pod is running step-4 Copy the dump files from host step-5exec into the postgresql-client pod step-6 evolve the env script. step-7 restore Mongo Restore step-1 Start the client pod step-2 copy the dump from host step-3 exec into the client pod step-4 restore step-5 Verify the restore step-6 exit the mongo client pod